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# Successful high-level accumulation of fish oil omega-3 long-chain polyunsaturated fatty acids in a transgenic oilseed crop (Ruiz-Lopez, N., et al; The plant journal 77, 198-208, 2014; http://www.ncbi.nlm.nih.gov/pubmed/24308505). [[Uspešna priprava gensko spremenjene oljne rastline z visoko vsebnostjo omega-3 polinenasičenih maščobnih kislin.]] Petra Malavašič, 20. marca 2015
# Successful high-level accumulation of fish oil omega-3 long-chain polyunsaturated fatty acids in a transgenic oilseed crop (Ruiz-Lopez, N., et al; The plant journal 77, 198-208, 2014; http://www.ncbi.nlm.nih.gov/pubmed/24308505). [[Uspešna priprava gensko spremenjene oljne rastline z visoko vsebnostjo omega-3 polinenasičenih maščobnih kislin.]] Petra Malavašič, 20. marca 2015
#A simplified and  accurate detection of the  genetically modified wheat MON71800 with one  calibrator plasmid (Jae Juan, S.,et al; Food Chemistry 176, 1-6, ;http://www.sciencedirect.com.nukweb.nuk.uni-lj.si/science/article/pii/S03088146140196572015 [[Poenostavljena in točna detekcija gensko spemenjene pšenice MON71800 z enim kalibratorskim plazmidom]] Matej Lesar, 20.marca 2015
#A simplified and  accurate detection of the  genetically modified wheat MON71800 with one  calibrator plasmid (Jae Juan, S.,et al; Food Chemistry 176, 1-6, ;http://www.sciencedirect.com.nukweb.nuk.uni-lj.si/science/article/pii/S03088146140196572015 [[Poenostavljena in točna detekcija gensko spemenjene pšenice MON71800 z enim kalibratorskim plazmidom]]. Matej Lesar, 20. marca 2015


'''Gensko spremenjene živali'''<br>
'''Gensko spremenjene živali'''<br>
Line 27: Line 27:
'''Terapevtiki'''<br>
'''Terapevtiki'''<br>
# Mind-controlled transgene expression by a wireless-powered optogenetic designer cell implant (M. Folcher; Nature Communications  5, 1–11, 2014; http://www.nature.com/ncomms/2014/141111/ncomms6392/full/ncomms6392.html) Z EEG nadzorovano izražanje transgena preko brezžično napajanega optogenetskega celičnega vsadka. Luka Smole, 10. aprila 2015
# Mind-controlled transgene expression by a wireless-powered optogenetic designer cell implant (M. Folcher; Nature Communications  5, 1–11, 2014; http://www.nature.com/ncomms/2014/141111/ncomms6392/full/ncomms6392.html) Z EEG nadzorovano izražanje transgena preko brezžično napajanega optogenetskega celičnega vsadka. Luka Smole, 10. aprila 2015
# Glycosylated enfuvirtide: A long-lasting glycopeptide with potent anti-HIV activity; http://pubs.acs.org/doi/full/10.1021/jm5016582
# Glycosylated enfuvirtide: A long-lasting glycopeptide with potent anti-HIV activity; http://pubs.acs.org/doi/full/10.1021/jm5016582 Sebastian Pleško, 10. aprila
# Microbicidal effects of α- and θ-defensins against antibiotic-resistant Staphylococcus aureus and Pseudomonas aeruginosa; http://ini.sagepub.com/content/21/1/17.long. Ana Kapraljević, 10. aprila


'''Encimi'''<br>
'''Encimi'''<br>
 
# Mojca Banič, 16. aprila 2015
# Construction of efficient xylose utilizing ''Pichia pastoris'' for industrial enzyme production (Li ''et al''; Microbial Cell Factories 14:22, 1-10, 2015; http://www.microbialcellfactories.com/content/14/1/22). Priprava ''Pichie pastoris'', ki učinkovito uporablja ksilozo, za industrijsko proizvodnjo encimov. Špela Tomaž, 17. aprila 2015
# Construction of efficient xylose utilizing ''Pichia pastoris'' for industrial enzyme production (Li ''et al''; Microbial Cell Factories 14:22, 1-10, 2015; http://www.microbialcellfactories.com/content/14/1/22). Priprava ''Pichie pastoris'', ki učinkovito uporablja ksilozo, za industrijsko proizvodnjo encimov. Špela Tomaž, 17. aprila 2015
# Špela Pohleven, 17. aprila 2015


'''Protitelesa'''<br>  
'''Protitelesa'''<br>  
# Optimization of heavy chain and light chain signal peptides for high level expression of therapeutic antibodies in CHO cells; http://dx.plos.org/10.1371/journal.pone.0116878. Tjaša Blatnik, 23. aprila 2015
# Functional mutations in and characterization of VHH against Helicobacter pylori urease (R. Hoseinpoor ''et al''; Applied Biochemistry and Biotechnology  172, 3079-3091, 2014; http://link.springer.com/article/10.1007/s12010-014-0750-4). Funkcionalne mutacije in karakterizacija VHH proti ureazi ''Helicobacter pylori''. Marko Radojković, 24. aprila 2015
# Functional mutations in and characterization of VHH against Helicobacter pylori urease (R. Hoseinpoor ''et al''; Applied Biochemistry and Biotechnology  172, 3079-3091, 2014; http://link.springer.com/article/10.1007/s12010-014-0750-4). Funkcionalne mutacije in karakterizacija VHH proti ureazi ''Helicobacter pylori''. Marko Radojković, 24. aprila 2015
# Ethanol  precipitation  for  purification  of  recombinant  antibodies (A. Tscheliessnig ''et al''; Journal of Biotechnology 188, 17-28, 2014; http://www.sciencedirect.com/science/article/pii/S0168165614007810). Čiščenje rekombinantnih protiteles z obarjanjem z etanolom. Urška Rauter, 24. aprila 2015
# Ethanol  precipitation  for  purification  of  recombinant  antibodies (A. Tscheliessnig ''et al''; Journal of Biotechnology 188, 17-28, 2014; http://www.sciencedirect.com/science/article/pii/S0168165614007810). Čiščenje rekombinantnih protiteles z obarjanjem z etanolom. Urška Rauter, 24. aprila 2015
# Optimization of heavy chain and light chain signal peptides for high level expression of therapeutic antibodies in CHO cells; http://dx.plos.org/10.1371/journal.pone.0116878.
 


'''Cepiva'''<br>
'''Cepiva'''<br>
 
# Tanja Korpar, 7. maja 2015
# A novel “priming-boosting” strategy for immune interventions in cervical cancer (S. Liao et al.; Molecular Immunology 64, 295-305, 2015, http://www.sciencedirect.com/science/article/pii/S0161589014003460. Nova "priming-boosting" strategija za imunsko posredovanje pri raku materničnega vratu. Anita Kustec, 8. maja 2015
# A novel “priming-boosting” strategy for immune interventions in cervical cancer (S. Liao et al.; Molecular Immunology 64, 295-305, 2015, http://www.sciencedirect.com/science/article/pii/S0161589014003460. Nova "priming-boosting" strategija za imunsko posredovanje pri raku materničnega vratu. Anita Kustec, 8. maja 2015
# Potentiation of anthrax vaccines using protective antigen-expressing viral replicon vectors (H.C. Wang et al.; Immunology letters 163, 206-213, 2015, http://www.ncbi.nlm.nih.gov/pubmed/25102364 ) Izboljšava cepiv proti antraksu z uporabo iz virusnih replikonov izvedenih vektorjev, ki omogočajo izražanje zaščitnega antigena. Daša Pavc, 8. maja 2015
# Potentiation of anthrax vaccines using protective antigen-expressing viral replicon vectors (H.C. Wang et al.; Immunology letters 163, 206-213, 2015, http://www.ncbi.nlm.nih.gov/pubmed/25102364 ) Izboljšava cepiv proti antraksu z uporabo iz virusnih replikonov izvedenih vektorjev, ki omogočajo izražanje zaščitnega antigena. Daša Pavc, 8. maja 2015


'''Male molekule in polimeri'''<br>
'''Male molekule in polimeri'''<br>
Iza Ogris, 15. maja 2015<br>
# Gašper Lavrenčič, 14. maja 2015
 
# Uroš Stupar, 14. maja 2015
# Iza Ogris, 15. maja 2015
# Chromosomal integration of hyaluronic acid synthesis (''has'') genes enhances the molecular weight of hyaluronan produced in ''Lactococcus lactis'' (R. V. Hmar et al; Biotechnol. J. 9 (12), 2014; http://dx.doi.org/10.1002/biot.201400215) Integracija genov za sintezo hialuronske kisline v kromosom bakterije ''Lactococcus lactis'' izboljša sintezo visokomolekularne hialuronske kisline. Maja Grdadolnik, 15. maja 2015
# Chromosomal integration of hyaluronic acid synthesis (''has'') genes enhances the molecular weight of hyaluronan produced in ''Lactococcus lactis'' (R. V. Hmar et al; Biotechnol. J. 9 (12), 2014; http://dx.doi.org/10.1002/biot.201400215) Integracija genov za sintezo hialuronske kisline v kromosom bakterije ''Lactococcus lactis'' izboljša sintezo visokomolekularne hialuronske kisline. Maja Grdadolnik, 15. maja 2015


'''Pretvorba biomase'''<br>
'''Pretvorba biomase'''<br>
22. maja 2015
# Eva Lucija Kozak, 21. maja 2015
# Nives Naraglav, 22. maja 2015
# Griša Prinčič, 22. maja 2015


'''Metabolično inženirstvo'''<br>
'''Metabolično inženirstvo'''<br>
 
# Andreja Bratovš, 28. maja 2015
# Metabolic engineering of Saccharomyces cerevisiae for production of fatty acid-derived biofuels and chemicals (Weerawat Runguphana, Jay D. Keasling; Metabolic Engineering, vol 21, January 2014, Pages 103–113; http://www.sciencedirect.com/science/article/pii/S1096717613000670). Metabolično inženirstvo ''Saccharomyces cerevisiae'' za proizvodnjo derivatov maščobnih kislin, ki so primerni za biogorivo in kemikalije. Dominik Kert, 29. maja 2015
# Metabolic engineering of Saccharomyces cerevisiae for production of fatty acid-derived biofuels and chemicals (Weerawat Runguphana, Jay D. Keasling; Metabolic Engineering, vol 21, January 2014, Pages 103–113; http://www.sciencedirect.com/science/article/pii/S1096717613000670). Metabolično inženirstvo ''Saccharomyces cerevisiae'' za proizvodnjo derivatov maščobnih kislin, ki so primerni za biogorivo in kemikalije. Dominik Kert, 29. maja 2015
# Metabolic engineering of Klebsiella pneumoniae for the production of cis,cis-muconic acid (Jung,H.-M. Jung,M.-Y. Oh, M.-K.;Applied Microbiology and Biotechnology, Published online: 14 February 2015; http://link.springer.com/article/10.1007/s00253-015-6442-3). Metabolno inženirstvo Klebsiella pneumoniae za produkcijo cis,cis-mukonične kisline. Jure Zabret, 29. maja 2015
# Metabolic engineering of Klebsiella pneumoniae for the production of cis,cis-muconic acid (Jung,H.-M. Jung,M.-Y. Oh, M.-K.;Applied Microbiology and Biotechnology, Published online: 14 February 2015; http://link.springer.com/article/10.1007/s00253-015-6442-3). Metabolno inženirstvo Klebsiella pneumoniae za produkcijo cis,cis-mukonične kisline. Jure Zabret, 29. maja 2015


'''Biološki viri energije'''<br>
'''Biološki viri energije'''<br>
5. junija 2015
# Tamara Marić, 4. junija 2015
# Jernej Pušnik, 4. junija 2015
# Nastja Pirman, 5. junija 2015
# Jana Verbančič, 5. junija 2015
 
'''Novi pristopi v molekularni biotehnologiji'''<br>
# Matja Zalar, 11. junija
# Monika Škrjanc, 11. junija

Revision as of 08:11, 31 March 2015

Seznam seminarjev iz Molekularne biotehnologije v študijskem letu 2014/15

Tabela za razpored po tednih bo objavljena v spletni učilnici, vanjo pa se vpišite tudi za kratke predstavitve novic (3 min, dvakrat v semestru). Na tej strani bo samo seznam odobrenih člankov za seminar in povezave do člankov in do povzetkov, ki jih morate objaviti najkasneje tri dni pred predstavitvijo (ponedeljek oz. torek). Angleški naslov prevedite tudi v slovenščino - to bo naslov povzetka, ki ga objavite na posebni strani, tako kot so to naredili kolegi pred vami (oz. lani).

Način vnosa:

  1. The importance of Arabidopsis glutathione peroxidase 8 for protecting Arabidopsis plant and E. coli cells against oxidative stress (A. Gaber; GM Crops & Food 5(1), 2014; http://dx.doi.org/10.4161/gmcr.26979) Pomen glutation peroksidaze 8 iz repnjakovca za zaščito rastline Arabidopsis thaliana in bakterije Escherichia coli pred oksidativnim stresom. Janez Novak, 15. marca 2014

(slovenski naslov povežite z novo stranjo, na kateri bo povzetek)


Naslovi odobrenih člankov po temah:

Gensko spremenjene rastline

  1. Successful high-level accumulation of fish oil omega-3 long-chain polyunsaturated fatty acids in a transgenic oilseed crop (Ruiz-Lopez, N., et al; The plant journal 77, 198-208, 2014; http://www.ncbi.nlm.nih.gov/pubmed/24308505). Uspešna priprava gensko spremenjene oljne rastline z visoko vsebnostjo omega-3 polinenasičenih maščobnih kislin. Petra Malavašič, 20. marca 2015
  2. A simplified and accurate detection of the genetically modified wheat MON71800 with one calibrator plasmid (Jae Juan, S.,et al; Food Chemistry 176, 1-6, ;http://www.sciencedirect.com.nukweb.nuk.uni-lj.si/science/article/pii/S03088146140196572015 Poenostavljena in točna detekcija gensko spemenjene pšenice MON71800 z enim kalibratorskim plazmidom. Matej Lesar, 20. marca 2015

Gensko spremenjene živali

  1. A novel adenoviral vector carrying an all-in-one Tet-On system with an autoregulatory loop for tight, inducible transgene expresion (H. Chen; et all.; BMC Biotechnology 2015, 15:4, doi:10.1186/s12896-015-0121-4; http://www.biomedcentral.com/1472-6750/15/4). Edvinas Grauželis, 27. marca 2015 (in English)
  2. Production of functional active human growth factors in insects used as living biofactories (B. Dudognon, et al; Journal of Biotechnology 184, 229–239, 2014; http://dx.doi.org/10.1016/j.jbiotec.2014.05.030). Proizvodnja funkcionalno aktivnih človeških rastnih faktorjev v insektih uporabljenih kot žive biotovarne Maxi Sagmeister, 27. marca 2015

Okolje

  1. Bioremediation of pesticide contaminated water using an organophosphate degrading enzyme immobilized on nonwoven polyester textiles (Yuan Gao et al., Enzyme and Microbial Technology, vol. 54, pages 38-44, 10.1.2014, http://www.sciencedirect.com/science/article/pii/S0141022913002044). Bioremediacija s pesticidi okužene vode z uporabo encima, ki razgrajuje organofosfate in je vezan na netkan poliestrski tekstil. Mitja Crček, 3. aprila 2015
  2. Biodegradation of atrazine by three transgenic grasses and alfalfa expressing a modified bacterial atrazine chlorohydrolase gene (A. W. Vail et al.; Transgenic Research, 29. 11. 2014; http://link.springer.com/article/10.1007/s11248-014-9851-7). Biorazgradnja atrazina s tremi transgenskimi travami in alfalfo, ki izražajo gen za modificirano bakterijsko atrazin klorohidrolazo. Mirjam Kmetič, 3. aprila 2015

Terapevtiki

  1. Mind-controlled transgene expression by a wireless-powered optogenetic designer cell implant (M. Folcher; Nature Communications 5, 1–11, 2014; http://www.nature.com/ncomms/2014/141111/ncomms6392/full/ncomms6392.html) Z EEG nadzorovano izražanje transgena preko brezžično napajanega optogenetskega celičnega vsadka. Luka Smole, 10. aprila 2015
  2. Glycosylated enfuvirtide: A long-lasting glycopeptide with potent anti-HIV activity; http://pubs.acs.org/doi/full/10.1021/jm5016582 Sebastian Pleško, 10. aprila
  3. Microbicidal effects of α- and θ-defensins against antibiotic-resistant Staphylococcus aureus and Pseudomonas aeruginosa; http://ini.sagepub.com/content/21/1/17.long. Ana Kapraljević, 10. aprila

Encimi

  1. Mojca Banič, 16. aprila 2015
  2. Construction of efficient xylose utilizing Pichia pastoris for industrial enzyme production (Li et al; Microbial Cell Factories 14:22, 1-10, 2015; http://www.microbialcellfactories.com/content/14/1/22). Priprava Pichie pastoris, ki učinkovito uporablja ksilozo, za industrijsko proizvodnjo encimov. Špela Tomaž, 17. aprila 2015
  3. Špela Pohleven, 17. aprila 2015

Protitelesa

  1. Optimization of heavy chain and light chain signal peptides for high level expression of therapeutic antibodies in CHO cells; http://dx.plos.org/10.1371/journal.pone.0116878. Tjaša Blatnik, 23. aprila 2015
  2. Functional mutations in and characterization of VHH against Helicobacter pylori urease (R. Hoseinpoor et al; Applied Biochemistry and Biotechnology 172, 3079-3091, 2014; http://link.springer.com/article/10.1007/s12010-014-0750-4). Funkcionalne mutacije in karakterizacija VHH proti ureazi Helicobacter pylori. Marko Radojković, 24. aprila 2015
  3. Ethanol precipitation for purification of recombinant antibodies (A. Tscheliessnig et al; Journal of Biotechnology 188, 17-28, 2014; http://www.sciencedirect.com/science/article/pii/S0168165614007810). Čiščenje rekombinantnih protiteles z obarjanjem z etanolom. Urška Rauter, 24. aprila 2015


Cepiva

  1. Tanja Korpar, 7. maja 2015
  2. A novel “priming-boosting” strategy for immune interventions in cervical cancer (S. Liao et al.; Molecular Immunology 64, 295-305, 2015, http://www.sciencedirect.com/science/article/pii/S0161589014003460. Nova "priming-boosting" strategija za imunsko posredovanje pri raku materničnega vratu. Anita Kustec, 8. maja 2015
  3. Potentiation of anthrax vaccines using protective antigen-expressing viral replicon vectors (H.C. Wang et al.; Immunology letters 163, 206-213, 2015, http://www.ncbi.nlm.nih.gov/pubmed/25102364 ) Izboljšava cepiv proti antraksu z uporabo iz virusnih replikonov izvedenih vektorjev, ki omogočajo izražanje zaščitnega antigena. Daša Pavc, 8. maja 2015

Male molekule in polimeri

  1. Gašper Lavrenčič, 14. maja 2015
  2. Uroš Stupar, 14. maja 2015
  3. Iza Ogris, 15. maja 2015
  4. Chromosomal integration of hyaluronic acid synthesis (has) genes enhances the molecular weight of hyaluronan produced in Lactococcus lactis (R. V. Hmar et al; Biotechnol. J. 9 (12), 2014; http://dx.doi.org/10.1002/biot.201400215) Integracija genov za sintezo hialuronske kisline v kromosom bakterije Lactococcus lactis izboljša sintezo visokomolekularne hialuronske kisline. Maja Grdadolnik, 15. maja 2015

Pretvorba biomase

  1. Eva Lucija Kozak, 21. maja 2015
  2. Nives Naraglav, 22. maja 2015
  3. Griša Prinčič, 22. maja 2015

Metabolično inženirstvo

  1. Andreja Bratovš, 28. maja 2015
  2. Metabolic engineering of Saccharomyces cerevisiae for production of fatty acid-derived biofuels and chemicals (Weerawat Runguphana, Jay D. Keasling; Metabolic Engineering, vol 21, January 2014, Pages 103–113; http://www.sciencedirect.com/science/article/pii/S1096717613000670). Metabolično inženirstvo Saccharomyces cerevisiae za proizvodnjo derivatov maščobnih kislin, ki so primerni za biogorivo in kemikalije. Dominik Kert, 29. maja 2015
  3. Metabolic engineering of Klebsiella pneumoniae for the production of cis,cis-muconic acid (Jung,H.-M. Jung,M.-Y. Oh, M.-K.;Applied Microbiology and Biotechnology, Published online: 14 February 2015; http://link.springer.com/article/10.1007/s00253-015-6442-3). Metabolno inženirstvo Klebsiella pneumoniae za produkcijo cis,cis-mukonične kisline. Jure Zabret, 29. maja 2015

Biološki viri energije

  1. Tamara Marić, 4. junija 2015
  2. Jernej Pušnik, 4. junija 2015
  3. Nastja Pirman, 5. junija 2015
  4. Jana Verbančič, 5. junija 2015

Novi pristopi v molekularni biotehnologiji

  1. Matja Zalar, 11. junija
  2. Monika Škrjanc, 11. junija