Seminarji SB 2015/16

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Seminarji iz Sintezne biologije v študijskem letu 2015/16 so:

Vir: knjiga SYNTHETIC BIOLOGY: ENGINEERING COMPLEXITY AND REFACTORING CELL CAPABILITIES

  • Production of fatty acid-derived valuable chemicals in synthetic microbes (Maja Grdadolnik)
  • Optimization of the IPP precursor supply for the production of lycopene, decaprenoxanthin and astaxanthin by Corynebacterium glutamicum (Griša Prinčič)
  • Engineering sugar utilization and microbial tolerance toward lignocellulose conversion (Kim Potočnik)
  • Cofactor engineering for enhancing the flux of metabolic pathways (Nastja Štemberger)
  • Can the natural diversity of quorum-sensing advance synthetic biology? (Tina Snoj)
  • Signal-to-noise ratio measures efficacy of biological computing devices and circuits (Jakob G. Lavrenčič)
  • A sense of balance: experimental investigation and modeling of a malonyl-CoA sensor in Escherichia coli (Ajda Rojc)
  • New transposon tools tailored for metabolic engineering of Gram-negative microbial cell factories (Rok Razpotnik)


Vir: knjiga SYNTHETIC BIOLOGY APPLICATIONS IN INDUSTRIAL MICROBIOLOGY

  • Recent Progress in Synthetic Biology for Microbial Production of C3–C10 Alcohols (Urška Rauter)
  • Visualizing Evolution in Real-Time Method for Strain Engineering (Samo Zakotnik)
  • Engineering Microbial Consortia to Enhance Biomining and Bioremediation (Maja Kostanjevec)
  • Engineering Microbial Chemical Factories to Produce Renewable “Biomonomers” (Nastja Pirman)
  • Application of Synthetic Biology in Cyanobacteria and Algae (Špela Tomaž)
  • Synthetic Feedback Loop Model for Increasing Microbial Biofuel Production Using a Biosensor (Jernej Pušnik)
  • Balance of XYL1 and XYL2 Expression in Different Yeast Chassis for Improved xylose Fermentation (Monika Praznik)
  • Design and Development of Synthetic Microbial Platform Cells for Bioenergy (Erik Mršnik)
  • Microbial Production of Isoprenoids Enabled by Synthetic Biology (Mikrobna produkcija izoprenoidov s sintezno biologijo) (Dominik Kert)
  • Chemical synthetic biology: a mini-review (Anka Hotko)


Seminarji iz preglednih člankov:

  • Towards engineering biological systems in a broader context (Aleksander Benčič)
  • Synthetic biology: Novel approaches for microbiology (Daša Janeš)
  • Tools and principles for microbial gene circuit engineering (Marko Radojković)
  • Sensitive cells: enabling tools for static and dynamic control of microbial metabolic pathways (Katja Leben)
  • Chassis optimization as a cornerstone for the application of synthetic biology based strategies in microbial secondary metabolism (Jure Zabret)
  • Recent advances and opportunities in synthetic logic gates engineering in living cells (Monika Biasizzo)
  • Programmable genetic circuits for pathway engineering (Urban Javoršek)
  • Better together: engineering and application of microbial symbioses (Nejc Petrišič)
  • Synthetic biology for microbial production of lipid-based biofuels (Urška Pevec)
  • Engineering Biosynthesis Mechanisms for Diversifying Polyhydroxyalkanoates (Mojca Banič)
  • Synthetic biology of fungal natural products (Estera Merljak)
  • Synthetic biology and biomimetic chemistry as converging technologies fostering a new generation of smart biosensors (Benjamin Bajželj)
  • How Synthetic Biology Would Reconsider Natural Bioluminescence and its Application (Ana Grom & Ana Unkovič)
  • Synthetic Biology-Toward Therapeutic Solutions (Tanja Korpar)
  • Synthetically modified mRNA for efficient and fast human iPS cell generation and direct transdifferentiation to myoblasts (Mirjana Malnar)
  • Mammalian synthetic biology: emerging medical applications (Maša Mirkovič)
  • Synthetic biology devices and circuits for RNA-based ‘smart vaccines’: a propositional review (Monika Škrjanc)