MBT seminarji 2015

Seznam seminarjev iz Molekularne biotehnologije v študijskem letu 2014/15

Tabela za razpored po tednih bo objavljena v spletni učilnici, vanjo pa se vpišite tudi za kratke predstavitve novic (3 min, dvakrat v semestru). Na tej strani bo samo seznam odobrenih člankov za seminar in povezave do člankov in do povzetkov, ki jih morate objaviti najkasneje tri dni pred predstavitvijo (ponedeljek oz. torek). Angleški naslov prevedite tudi v slovenščino - to bo naslov povzetka, ki ga objavite na posebni strani, tako kot so to naredili kolegi pred vami (oz. lani).

Način vnosa:

1. The importance of Arabidopsis glutathione peroxidase 8 for protecting Arabidopsis plant and E. coli cells against oxidative stress (A. Gaber; GM Crops & Food 5(1), 2014; http://dx.doi.org/10.4161/gmcr.26979) Pomen glutation peroksidaze 8 iz repnjakovca za zaščito rastline Arabidopsis thaliana in bakterije Escherichia coli pred oksidativnim stresom. Janez Novak, 15. marca 2014

(slovenski naslov povežite z novo stranjo, na kateri bo povzetek)

Naslovi odobrenih člankov po temah:

Gensko spremenjene rastline

1. Successful high-level accumulation of fish oil omega-3 long-chain polyunsaturated fatty acids in a transgenic oilseed crop (Ruiz-Lopez, N., et al; The plant journal 77, 198-208, 2014; http://www.ncbi.nlm.nih.gov/pubmed/24308505). Uspešna priprava gensko spremenjene oljne rastline z visoko vsebnostjo omega-3 polinenasičenih maščobnih kislin. Petra Malavašič, 20. marca 2015
2. A simplified and accurate detection of the genetically modified wheat MON71800 with one calibrator plasmid (Jae Juan, S.,et al; Food Chemistry 176, 1-6, ;http://www.sciencedirect.com.nukweb.nuk.uni-lj.si/science/article/pii/S03088146140196572015 Poenostavljena in točna detekcija gensko spemenjene pšenice MON71800 z enim kalibratorskim plazmidom. Matej Lesar, 20. marca 2015

Gensko spremenjene živali

1. A novel adenoviral vector carrying an all-in-one Tet-On system with an autoregulatory loop for tight, inducible transgene expresion (H. Chen; et all.; BMC Biotechnology 2015, 15:4, doi:10.1186/s12896-015-0121-4; http://www.biomedcentral.com/1472-6750/15/4). Edvinas Grauželis, 27. marca 2015 (in English)
2. Production of functional active human growth factors in insects used as living biofactories (B. Dudognon, et al; Journal of Biotechnology 184, 229–239, 2014; http://dx.doi.org/10.1016/j.jbiotec.2014.05.030). Proizvodnja funkcionalno aktivnih človeških rastnih faktorjev v insektih uporabljenih kot žive biotovarne Maxi Sagmeister, 27. marca 2015

Okolje

1. Bioremediation of pesticide contaminated water using an organophosphate degrading enzyme immobilized on nonwoven polyester textiles (Yuan Gao et al., Enzyme and Microbial Technology, vol. 54, pages 38-44, 10.1.2014, http://www.sciencedirect.com/science/article/pii/S0141022913002044). Bioremediacija s pesticidi okužene vode z uporabo encima, ki razgrajuje organofosfate in je vezan na netkan poliestrski tekstil. Mitja Crček, 3. aprila 2015
2. Biodegradation of atrazine by three transgenic grasses and alfalfa expressing a modified bacterial atrazine chlorohydrolase gene (A. W. Vail et al.; Transgenic Research, 29. 11. 2014; http://link.springer.com/article/10.1007/s11248-014-9851-7). Biorazgradnja atrazina s tremi transgenskimi travami in lucerno, ki izražajo gen za modificirano bakterijsko atrazin klorohidrolazo. Mirjam Kmetič, 3. aprila 2015

Terapevtiki

1. Glycosylated enfuvirtide: A long-lasting glycopeptide with potent anti-HIV activity; http://pubs.acs.org/doi/full/10.1021/jm5016582 Glikoliziran Enfuvirtid: glikopeptid z močno proti HIV aktivnostjo s podaljšanim delovanjem. Sebastian Pleško, 10. aprila
2. Microbicidal effects of α- and θ-defensins against antibiotic-resistant Staphylococcus aureus and Pseudomonas aeruginosa; http://ini.sagepub.com/content/21/1/17.long. Mikrobicidno delovanje α in θ defenzinov na antibiotik-odporne Staphylococcus aureus in Pseudomonas aeruginosa. Ana Kapraljević, 10. aprila

Encimi

1. Immobilization and controlled release of β-galactosidase from chitosan-grafted hydrogels; http://www.sciencedirect.com/science/article/pii/S0308814615001028. Imobilizacija in nadzorovano sproščanje β-galaktozidaze iz hitozanskega hidrogela. Mojca Banič, 16. aprila 2015
2. Construction of efficient xylose utilizing Pichia pastoris for industrial enzyme production (Li et al; Microbial Cell Factories 14:22, 1-10, 2015; http://www.microbialcellfactories.com/content/14/1/22). Priprava Pichie pastoris, ki učinkovito uporablja ksilozo, za industrijsko proizvodnjo encimov. Špela Tomaž, 17. aprila 2015
3. Postharvest application of a novel chitinase cloned from Metschnikowia fructicola and overexpressed in Pichia pastoris to control brown rot of peaches; http://www.sciencedirect.com/science/article/pii/S0168160515000033. Uporaba hitinaze, klonirane iz Metschnikowie fructicola in prekomerno izražene v Pichii pastoris za nadzor rjave gnilobe breskev po obiranju Špela Pohleven, 17. aprila 2015

Protitelesa

1. Optimization of heavy chain and light chain signal peptides for high level expression of therapeutic antibodies in CHO cells; http://dx.plos.org/10.1371/journal.pone.0116878. Optimizacija signalnih peptidov težkih in lahkih verig za večjo ekspresijo terapevtskih protiteles v CHO celičnih linijah. Optimizacija signalnih peptidov težkih in lahkih verig za večjo ekspresijo terapevtskih protiteles v CHO celičnih linijah Tjaša Blatnik, 23. aprila 2015
2. Ethanol precipitation for purification of recombinant antibodies (A. Tscheliessnig et al; Journal of Biotechnology 188, 17-28, 2014; http://www.sciencedirect.com/science/article/pii/S0168165614007810). Čiščenje rekombinantnih protiteles z obarjanjem z etanolom. Urška Rauter, 24. aprila 2015
3. Functional mutations in and characterization of VHH against Helicobacter pylori urease (R. Hoseinpoor et al; Applied Biochemistry and Biotechnology 172, 3079-3091, 2014; http://link.springer.com/article/10.1007/s12010-014-0750-4). Funkcionalne mutacije in karakterizacija VHH proti ureazi Helicobacter pylori. Marko Radojković, 7. maja 2015

Cepiva

1. Development of anti-E6 pegylated lipoplexes for mucosal application in the context of cervical preneoplastic lesions; http://www.sciencedirect.com/science/article/pii/S0378517315001507. Tanja Korpar, 7. maja 2015
2. A novel “priming-boosting” strategy for immune interventions in cervical cancer (S. Liao et al.; Molecular Immunology 64, 295-305, 2015, http://www.sciencedirect.com/science/article/pii/S0161589014003460. Nova "priming-boosting" strategija za imunsko posredovanje pri raku materničnega vratu. Anita Kustec, 8. maja 2015
3. Potentiation of anthrax vaccines using protective antigen-expressing viral replicon vectors (H.C. Wang et al.; Immunology letters 163, 206-213, 2015, http://www.ncbi.nlm.nih.gov/pubmed/25102364 ) Izboljšava cepiv proti antraksu z uporabo iz virusnih replikonov izvedenih vektorjev, ki omogočajo izražanje zaščitnega antigena. Daša Pavc, 8. maja 2015

Male molekule in polimeri

1. Methanol-induced chain termination in poly(3-hydroxybutyrate) biopolymers: Molecular weight control; http://www.sciencedirect.com/science/article/pii/S0141813014008307. Gašper Lavrenčič, 14. maja 2015
2. Purification and characterization of gamma poly glutamic acid from newly Bacillus licheniformis NRC20; http://www.sciencedirect.com/science/article/pii/S0141813014008216. Uroš Stupar, 14. maja 2015
3. Iza Ogris, 15. maja 2015
4. Chromosomal integration of hyaluronic acid synthesis (has) genes enhances the molecular weight of hyaluronan produced in Lactococcus lactis (R. V. Hmar et al; Biotechnol. J. 9 (12), 2014; http://dx.doi.org/10.1002/biot.201400215) Integracija genov za sintezo hialuronske kisline v kromosom bakterije Lactococcus lactis izboljša sintezo visokomolekularne hialuronske kisline. Maja Grdadolnik, 15. maja 2015

Pretvorba biomase

1. Effect of pretreatment methods on the synergism of cellulase and xylanase during the hydrolysis of bagasse; http://www.sciencedirect.com/science/article/pii/S0960852415002114. Eva Lucija Kozak, 21. maja 2015
2. Third generation biohydrogen production by Clostridium butyricum and adapted mixed cultures from Scenedesmus obliquus microalga biomass; http://www.sciencedirect.com/science/article/pii/S0016236115002550?np=y. Nives Naraglav, 22. maja 2015
3. Bio-catalytic action of twin-screw extruder enzymatic hydrolysis on the deconstruction of annual plant material: Case of sweet corn co-products; http://www.sciencedirect.com/science/article/pii/S0926669015000436. Griša Prinčič, 22. maja 2015

Metabolično inženirstvo

1. Engineering lipid overproduction in the oleaginous yeast Yarrowia lipolytica;http://www.sciencedirect.com/science/article/pii/S1096717615000166. Andreja Bratovš, 28. maja 2015
2. Metabolic engineering of Saccharomyces cerevisiae for production of fatty acid-derived biofuels and chemicals (Weerawat Runguphana, Jay D. Keasling; Metabolic Engineering, vol 21, January 2014, Pages 103–113; http://www.sciencedirect.com/science/article/pii/S1096717613000670). Metabolično inženirstvo Saccharomyces cerevisiae za proizvodnjo derivatov maščobnih kislin, ki so primerni za biogorivo in kemikalije. Dominik Kert, 29. maja 2015
3. Metabolic engineering of Klebsiella pneumoniae for the production of cis,cis-muconic acid (Jung,H.-M. Jung,M.-Y. Oh, M.-K.;Applied Microbiology and Biotechnology, Published online: 14 February 2015; http://link.springer.com/article/10.1007/s00253-015-6442-3). Metabolno inženirstvo Klebsiella pneumoniae za produkcijo cis,cis-mukonične kisline. Jure Zabret, 29. maja 2015

Biološki viri energije

1. Anodic and cathodic microbial communities in single chamber microbial fuel cells; http://www.sciencedirect.com/science/article/pii/S1871678414021694. Tamara Marić, 4. junija 2015
2. Combination of dry dark fermentation and mechanical pretreatment for lignocellulosic deconstruction: An innovative strategy for biofuels and volatile fatty acids recovery; http://www.sciencedirect.com/science/article/pii/S0306261915002196. Jernej Pušnik, 4. junija 2015
3. Potential use of feedlot cattle manure for bioethanol production; http://www.sciencedirect.com/science/article/pii/S0960852415001960. Nastja Pirman, 5. junija 2015
4. Cellulolytic enzymes produced by a newly isolated soil fungus Penicillium sp. TG2 with potential for use in cellulosic ethanol production; http://www.sciencedirect.com/science/article/pii/S0960148114007022. Jana Verbančič, 5. junija 2015

Novi pristopi v molekularni biotehnologiji

1. Exploring the potential of algae/bacteria interactions; http://www.sciencedirect.com/science/article/pii/S0958166915000269. Matja Zalar, 11. junija
2. How close we are to achieving commercially viable large-scale photobiological hydrogen production by cyanobacteria: A review of the biological aspects; http://www.mdpi.com/2075-1729/5/1/997/htm. Monika Škrjanc, 11. junija
3. Mind-controlled transgene expression by a wireless-powered optogenetic designer cell implant (M. Folcher; Nature Communications 5, 1–11, 2014; http://www.nature.com/ncomms/2014/141111/ncomms6392/full/ncomms6392.html) Z EEG nadzorovano izražanje transgena preko brezžično napajanega optogenetskega celičnega vsadka. Luka Smole, 11. junija 2015