Seminarji SB 2015/16: Difference between revisions
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* [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4571725/ Recent advances and opportunities in synthetic logic gates engineering in living cells] ([[Napredki v načrtovanju bioloških logičnih vrat v živih celicah]]) (Monika Biasizzo) | * [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4571725/ Recent advances and opportunities in synthetic logic gates engineering in living cells] ([[Napredki v načrtovanju bioloških logičnih vrat v živih celicah]]) (Monika Biasizzo) | ||
* Programmable genetic circuits for pathway engineering (Urban Javoršek) | * Programmable genetic circuits for pathway engineering (Urban Javoršek) | ||
* [http://web.media.mit.edu/~neri/MATTER.MEDIA/Publications/Better_together-_engineering_and_application_of_microbial_symbioses.pdf Better together: engineering and application of microbial symbioses] (Nejc Petrišič) | * [http://web.media.mit.edu/~neri/MATTER.MEDIA/Publications/Better_together-_engineering_and_application_of_microbial_symbioses.pdf Better together: engineering and application of microbial symbioses] ([[http://wiki.fkkt.uni-lj.si/index.php/V_slogi_je_mo%C4%8D:_na%C4%8Drtovanje_in_uporaba_mikrobne_simbioze]]) (Nejc Petrišič) | ||
* Synthetic biology for microbial production of lipid-based biofuels (Urška Pevec) | * Synthetic biology for microbial production of lipid-based biofuels (Urška Pevec) | ||
* Engineering Biosynthesis Mechanisms for Diversifying Polyhydroxyalkanoates (Mojca Banič) | * Engineering Biosynthesis Mechanisms for Diversifying Polyhydroxyalkanoates (Mojca Banič) | ||
Revision as of 08:11, 9 January 2016
Seminarji iz Sintezne biologije v študijskem letu 2015/16 so:
Vir: knjiga SYNTHETIC BIOLOGY: ENGINEERING COMPLEXITY AND REFACTORING CELL CAPABILITIES
- Production of fatty acid-derived valuable chemicals in synthetic microbes (Proizvodnja kemikalij iz derivatov maščobnih kislin s pomočjo sintetičnih mikroorganizmov) (Maja Grdadolnik)
- Optimization of the IPP precursor supply for the production of lycopene, decaprenoxanthin and astaxanthin by Corynebacterium glutamicum (Optimizacija sinteze IPP kot prekursorja za produkcijo likopena, dekaprenoksantina in astaksantina v Corynebacterium glutamicum) (Griša Prinčič)
- Engineering sugar utilization and microbial tolerance toward lignocellulose conversion [1] (Kim Potočnik)
- Cofactor engineering for enhancing the flux of metabolic pathways INŽENIRING KOFAKTORJEV ZA IZBOLJŠANJE METABOLIČNIH POTI (Nastja Štemberger)
- Can the natural diversity of quorum-sensing advance synthetic biology? (Ali lahko naravna diverziteta quorum sensinga pripomore k napredku v sintezni biologiji?) (Tina Snoj)
- Signal-to-noise ratio measures efficacy of biological computing devices and circuits (Določanje učinkovitosti bioloških naprav in vezij z razmerjem signal-šum) (Jakob G. Lavrenčič)
- A sense of balance: experimental investigation and modeling of a malonyl-CoA sensor in Escherichia coli (Senzor za malonil-CoA v bakteriji Escherichia coli) (Ajda Rojc)
- New transposon tools tailored for metabolic engineering of Gram-negative microbial cell factories (Metabolični inženiring gram-negativnih bakterij s transpozonskim sistemom) (Rok Razpotnik)
Vir: knjiga SYNTHETIC BIOLOGY APPLICATIONS IN INDUSTRIAL MICROBIOLOGY
- Recent Progress in Synthetic Biology for Microbial Production of C3–C10 Alcohols (Urška Rauter) (Napredki v sintezni biologiji pri proizvodnji C3-C10 alkoholov v mikroorganizmih)
- Visualizing Evolution in Real-Time Method for Strain Engineering (Vizualizacija evolucije v realnem času – metoda za sevno inženirstvo) (Samo Zakotnik)
- Engineering Microbial Consortia to Enhance Biomining and Bioremediation (Načrtovanje mikrobnih konzorcijev za izboljšanje biorudarstva in bioremediacije) (Maja Kostanjevec)
- Engineering Microbial Chemical Factories to Produce Renewable “Biomonomers” (Mikrobiološka proizvodnja obnovljivih biomonomerov in bioplastike)(Nastja Pirman)
- Application of Synthetic Biology in Cyanobacteria and Algae (Uporaba sintezne biologije v cianobakterijah in algah) (Špela Tomaž)
- Synthetic Feedback Loop Model for Increasing Microbial Biofuel Production Using a Biosensor (Jernej Pušnik)
- Balance of XYL1 and XYL2 Expression in Different Yeast Chassis for Improved xylose Fermentation (Ravnotežje med ekspresijo XYL1 in XYL2 v različnih šasijah kvasovk v povezavi s povečano fermentacijo ksiloze) (Monika Praznik)
- Design and Development of Synthetic Microbial Platform Cells for Bioenergy (Načrtovanje in razvijanje sintetičnih mikrobnih celičnih platform za pridobivanje bioenergije)(Erik Mršnik)
- Microbial Production of Isoprenoids Enabled by Synthetic Biology (Mikrobna produkcija izoprenoidov s sintezno biologijo) (Dominik Kert)
- Chemical synthetic biology: a mini-review (Kratki pregled kemijske sintezne biologije) (Anka Hotko)
Seminarji iz preglednih člankov:
- Towards engineering biological systems in a broader context (Inženiring bioloških sistemov v širšem kontekstu) (Aleksander Benčič)
- Synthetic biology: Novel approaches for microbiology (Sintezno biološki pristopi v mikrobiologiji) (Daša Janeš)
- Tools and principles for microbial gene circuit engineering (Marko Radojković)
- Sensitive cells: enabling tools for static and dynamic control of microbial metabolic pathways (Dinamično uravnavanje (regulacija) metabolnih poti) (Katja Leben)
- Chassis optimization as a cornerstone for the application of synthetic biology based strategies in microbial secondary metabolism (Oprimizacija šasij kot osnovni korak pri uporabi sintezno biološkega pristopa pri karakterizaciji mikrobnega sekundarnega metabolizma) (Jure Zabret)
- Recent advances and opportunities in synthetic logic gates engineering in living cells (Napredki v načrtovanju bioloških logičnih vrat v živih celicah) (Monika Biasizzo)
- Programmable genetic circuits for pathway engineering (Urban Javoršek)
- Better together: engineering and application of microbial symbioses ([[2]]) (Nejc Petrišič)
- Synthetic biology for microbial production of lipid-based biofuels (Urška Pevec)
- Engineering Biosynthesis Mechanisms for Diversifying Polyhydroxyalkanoates (Mojca Banič)
- Synthetic biology of fungal natural products (Estera Merljak)
- Synthetic biology and biomimetic chemistry as converging technologies fostering a new generation of smart biosensors (Benjamin Bajželj)
- How Synthetic Biology Would Reconsider Natural Bioluminescence and its Application (Ana Grom & Ana Unkovič)
- Synthetic Biology-Toward Therapeutic Solutions (Tanja Korpar)
- Synthetically modified mRNA for efficient and fast human iPS cell generation and direct transdifferentiation to myoblasts (Mirjana Malnar)
- Mammalian synthetic biology: emerging medical applications (Maša Mirkovič)
- Synthetic biology devices and circuits for RNA-based ‘smart vaccines’: a propositional review (Monika Škrjanc)
